- Study Type: Vaccine
The objective of this study is to: 1) Characterize the immune responsiveness to administration of non-live vaccines in three cohorts of healthy adult subjects through the analysis of blood leukocytes transcriptional profiles. 2) Validate whole blood transcriptional profiles generated from standard 3mL blood draws versus 200uL blood draws obtained by finger stick. 3) Discover potential biomarkers for immune-responsiveness to non-live vaccines.
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A total of 621 blood samples were collected either by venipuncture (387) or finger prick (234) from four groups of healthy adults receiving either, 2009/10 seasonal influenza or 23-valent pneumococcal vaccine or placebo (saline) injections. Subjects were recruited in 3 cohorts with 4-7 individuals per group; cohort 3 was recruited for validation of the systemic day 1 immune signature in response to seasonal influenza and pneumococcal vaccination. From each subject, peripheral blood was drawn into Tempus tubes (Applied Biosystems) or obtained by finger prick into micro capillaries and then transferred into tempus reagent to lyse blood cells and stabilize RNA before storing at -80ºC until mRNA extraction. The training set for transcriptional profiling of blood obtained by venipuncture was performed in cohort 1 which included 6 healthy adult individuals receiving seasonal influenza vaccine, 6 healthy adult individuals receiving pneumococcal vaccine, and 6 healthy adult individuals receiving placebo (saline injections). The test set for transcriptional profiling of blood obtained by venipuncture was performed in cohort 2 which included 6 healthy adult individuals receiving seasonal influenza vaccine, 6 healthy adult individuals receiving pneumococcal vaccine, and 6 healthy adult individuals receiving placebo (saline injections). The validation set for confirming systemic day 1 transcriptome immune signature in response to seasonal influenza and pneumococcal vaccination was performed in cohort 3 which included 6 healthy adult individuals receiving seasonal influenza vaccine and 4 healthy adult individuals receiving pneumococcal vaccine. The training set for transcriptional profiling of blood obtained by finger prick was performed in cohort 2 and the test set in cohort 1.
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Sample ID | !Sample Title | Age | Ethnicity | Gender | group |
---|---|---|---|---|---|
GSM745184 | 009_179_039 _D0 [5445279045A] | 26 | Non Hispanic or Latino | M | Influenza day0 |
GSM745185 | 009_179_044 _D0 [5445279045F] | 23 | Non Hispanic or Latino | F | Influenza day0 |
GSM745186 | 009_179_040 _D1 [5445279045J] | 44 | F | Influenza day1 | |
GSM745187 | 009_179_044 _D28 [5445279045K] | 23 | Non Hispanic or Latino | F | Influenza day28 |
GSM745188 | 009_179_039 _D28 [5447320002A] | 26 | Non Hispanic or Latino | M | Influenza day28 |
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Sample ID | !Sample Title | Age | Ethnicity | Gender | Group | Day | Race | Vaccine | Subject id | Blood source | Sample set |
---|---|---|---|---|---|---|---|---|---|---|---|
GSM745184 | 009_179_039 _D0 [5445279045A] |
26 |
Non Hispanic or Latino |
M |
Influenza day0 |
0 |
Caucasian |
Influenza |
39 |
Vein |
Validation_Vein |
GSM745185 | 009_179_044 _D0 [5445279045F] |
23 |
Non Hispanic or Latino |
F |
Influenza day0 |
0 |
Caucasian |
Influenza |
44 |
Vein |
Validation_Vein |
GSM745186 | 009_179_040 _D1 [5445279045J] |
44 |
F |
Influenza day1 |
1 |
African American |
Influenza |
40 |
Vein |
Validation_Vein |
|
GSM745187 | 009_179_044 _D28 [5445279045K] |
23 |
Non Hispanic or Latino |
F |
Influenza day28 |
28 |
Caucasian |
Influenza |
44 |
Vein |
Validation_Vein |
GSM745188 | 009_179_039 _D28 [5447320002A] |
26 |
Non Hispanic or Latino |
M |
Influenza day28 |
28 |
Caucasian |
Influenza |
39 |
Vein |
Validation_Vein |
GSM745189 | 009_179_041 _D28 [5447320002B] |
40 |
Non Hispanic or Latino |
M |
Influenza day28 |
28 |
Caucasian |
Influenza |
41 |
Vein |
Validation_Vein |
GSM745190 | 009_179_042 _D1 [5447320002C] |
26 |
Non Hispanic or Latino |
M |
Influenza day1 |
1 |
Caucasian |
Influenza |
42 |
Vein |
Validation_Vein |
GSM745191 | 009_179_043 _D1 [5447320002D] |
36 |
Non Hispanic or Latino |
F |
Influenza day1 |
1 |
Caucasian |
Influenza |
43 |
Vein |
Validation_Vein |
GSM745192 | 009_179_042 _D0 [5447320002F] |
26 |
Non Hispanic or Latino |
M |
Influenza day0 |
0 |
Caucasian |
Influenza |
42 |
Vein |
Validation_Vein |
GSM745193 | 009_179_039 _D1 [5447320002G] |
26 |
Non Hispanic or Latino |
M |
Influenza day1 |
1 |
Caucasian |
Influenza |
39 |
Vein |
Validation_Vein |
GSM745194 | 009_179_040 _D0 [5447320002H] |
44 |
F |
Influenza day0 |
0 |
African American |
Influenza |
40 |
Vein |
Validation_Vein |
|
GSM745195 | 009_179_040 _D28 [5447320002I] |
44 |
F |
Influenza day28 |
28 |
African American |
Influenza |
40 |
Vein |
Validation_Vein |
|
GSM745196 | 009_179_042 _D28 [5447320002J] |
26 |
Non Hispanic or Latino |
M |
Influenza day28 |
28 |
Caucasian |
Influenza |
42 |
Vein |
Validation_Vein |
GSM745197 | 009_179_043 _D0 [5447320002K] |
36 |
Non Hispanic or Latino |
F |
Influenza day0 |
0 |
Caucasian |
Influenza |
43 |
Vein |
Validation_Vein |
GSM745198 | 009_179_041 _D0 [5447320002L] |
40 |
Non Hispanic or Latino |
M |
Influenza day0 |
0 |
Caucasian |
Influenza |
41 |
Vein |
Validation_Vein |
GSM745199 | 009_179_041 _D1 [5447320003B] |
40 |
Non Hispanic or Latino |
M |
Influenza day1 |
1 |
Caucasian |
Influenza |
41 |
Vein |
Validation_Vein |
GSM745200 | 009_179_044 _D1 [5447320003D] |
23 |
Non Hispanic or Latino |
F |
Influenza day1 |
1 |
Caucasian |
Influenza |
44 |
Vein |
Validation_Vein |
GSM745201 | 009_179_043 _D28 [5447320003G] |
36 |
Non Hispanic or Latino |
F |
Influenza day28 |
28 |
Caucasian |
Influenza |
43 |
Vein |
Validation_Vein |
GSM745202 | 009_179_048 _D1 [5445279045B] |
40 |
Hispanic |
F |
Pneumovax day1 |
1 |
Caucasian |
Pneumovax |
48 |
Vein |
Validation_Vein |
GSM745203 | 009_179_048 _D28 [5445279045C] |
40 |
Hispanic |
F |
Pneumovax day28 |
28 |
Caucasian |
Pneumovax |
48 |
Vein |
Validation_Vein |
GSM745204 | 009_179_046 _D1 [5445279045E] |
31 |
Non Hispanic or Latino |
F |
Pneumovax day1 |
1 |
Caucasian |
Pneumovax |
46 |
Vein |
Validation_Vein |
GSM745205 | 009_179_046 _D0 [5445279045G] |
31 |
Non Hispanic or Latino |
F |
Pneumovax day0 |
0 |
Caucasian |
Pneumovax |
46 |
Vein |
Validation_Vein |
GSM745206 | 009_179_046 _D28 [5445279045H] |
31 |
Non Hispanic or Latino |
F |
Pneumovax day28 |
28 |
Caucasian |
Pneumovax |
46 |
Vein |
Validation_Vein |
GSM745207 | 009_179_045 _D1 [5445279045L] |
45 |
Non Hispanic or Latino |
M |
Pneumovax day1 |
1 |
Caucasian |
Pneumovax |
45 |
Vein |
Validation_Vein |
GSM745208 | 009_179_045 _D28 [5447320002E] |
45 |
Non Hispanic or Latino |
M |
Pneumovax day28 |
28 |
Caucasian |
Pneumovax |
45 |
Vein |
Validation_Vein |
GSM745209 | 009_179_047 _D0 [5447320003A] |
23 |
Non Hispanic or Latino |
M |
Pneumovax day0 |
0 |
Caucasian |
Pneumovax |
47 |
Vein |
Validation_Vein |
GSM745210 | 009_179_047 _D1 [5447320003C] |
23 |
Non Hispanic or Latino |
M |
Pneumovax day1 |
1 |
Caucasian |
Pneumovax |
47 |
Vein |
Validation_Vein |
GSM745211 | 009_179_048 _D0 [5447320003E] |
40 |
Hispanic |
F |
Pneumovax day0 |
0 |
Caucasian |
Pneumovax |
48 |
Vein |
Validation_Vein |
GSM745212 | 009_179_047 _D28 [5447320003F] |
23 |
Non Hispanic or Latino |
M |
Pneumovax day28 |
28 |
Caucasian |
Pneumovax |
47 |
Vein |
Validation_Vein |
GSM745213 | 009_179_045 _D0 [5447320003H] |
45 |
Non Hispanic or Latino |
M |
Pneumovax day0 |
0 |
Caucasian |
Pneumovax |
45 |
Vein |
Validation_Vein |
Name | ||
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