SIDRA

Sample Set Annotation Tool

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Disease

Coronavirus, eneterovirus, RSV, Rhinovirus, Infleunza (1)
 H1N1 (2)
 H1N1, H3N2 (1)
 H1N1, Rotavirus (1)
 Influenza (11)
 Influenza vaccine (20)
 Influenza, Pneumonia (1)
 Rhinovirus, H1N1, H3N2 (1)
 Rhinovirus, RSV, influenza A N3N2 (1)
 RSV (1)
 RSV, Influenza (1)
 RSV, Influenza, bacterial infection (1)
 RSV, Influenza, Rhinovirus (2)

Sample Source

PBMC (16)
 Whole Blood (28)

Species

Homo sapiens (44)

Analyst

Platform

Affymetrix HG-U133A (4)
 Affymetrix HG-U133_Plus_2 (4)
 Affymetrix HT_HG-U133_Plus_PM v1 (8)
 Affymetrix HuGene 1.0 ST v1 (2)
 Affymetrix PrimeView v1 (1)
 Illumina HumanHT-12 v3 (11)
 Illumina HumanHT-12 v4 (11)
 Illumina HumanWG-6 v2 (1)
 Illumina HumanWG-6 v3 (2)

Institution

GEO (44)

Sample Set Annotation Tool

Sample Set Platform Species Disease Sample Source Sample Count  
Blood transcriptome of human bacterial and influenza A pneumonia. GSE40012 Homo sapiens Influenza, Pneumonia Whole Blood 190
Expression profiling of critically ill influenza and bacterial pneumonia patients, also influenza vaccination recipients. GSE20346 Homo sapiens Influenza Whole Blood 81
FACS-sorted cells from Young Adults Vaccinated with Influenza TIV or LAIV Vaccines during 2008/09 Flu Season. GSE29618 Homo sapiens Influenza vaccine PBMC 84
Gene expression analysis in children with complex seizures by influenza A (H1N1)pdm09 or rotavirus gastroenteritis. GSE50628 Homo sapiens H1N1, Rotavirus Whole Blood 32
Gene expression analysis of Influenza vaccine response in Young and Old - Year 1. GSE59635 Homo sapiens Influenza vaccine PBMC 72
Gene expression analysis of Influenza vaccine response in Young and Old - Year 2. GSE59654 Homo sapiens Influenza vaccine PBMC 156
Gene expression signatures of symptomatic respiratory viral infection in adults. GSE17156 Homo sapiens Rhinovirus, RSV, influenz ... Whole Blood 113
Genome-wide analysis of whole blood transcriptional response to Respiratory Syncytial Virus (RSV), Influenza and Rhinovirus lower respiratory tract infection (LRTI) in children. GSE38900 (GPL10558) Homo sapiens RSV, Influenza, Rhinoviru ... Whole Blood 36
Genome-wide analysis of whole blood transcriptional response to Respiratory Syncytial Virus, Influenza and Rhinovirus lower respiratory tract infection (LRTI) in children. GSE38900 (GPL6884) Homo sapiens RSV, Influenza, Rhinoviru ... Whole Blood 205
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections I. GSE30059 Homo sapiens Influenza Whole Blood 72
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II -GSE48762 Homo sapiens Influenza Whole Blood 621
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II. GSE48762_Finger prick-test set. Homo sapiens Influenza Whole Blood 49
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II. GSE48762_Finger prick-Training Set Homo sapiens Influenza Whole Blood 185
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II. GSE48762_venipuncture set test. Homo sapiens Influenza Whole Blood 143
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II. GSE48762_Venipuncture-Training Set. Homo sapiens Influenza Whole Blood 214
Genome-wide profiling of whole blood from healthy adult volunteers before and after receiving non-live vaccines including seasonal influenza or pneumococcal vaccine or placebo (saline) injections II. GSE48762_Venipuncture-Validation Set. Homo sapiens Influenza Whole Blood 30
Global Analyses of Human Immune Variation Reveal Baseline Predictors of Postvaccination Responses. GSE47353 Homo sapiens Influenza vaccine PBMC 292
Host gene expression signatures of influenza A H1N1 and H3N2 virus infection in adults. GSE52428 Homo sapiens H1N1, H3N2 Whole Blood 649
Host transcriptional response to influenza and other acute respiratory viral infections – a prospective cohort study. GSE68310 Homo sapiens Coronavirus, eneterovirus ... Whole Blood 880
Hosts responses in critical disease caused by pandemic H1N1. GSE21802 Homo sapiens H1N1 Whole Blood 40
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